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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
24
ChIP-seq
5
DNase-seq
3
total RNA-seq
ATAC-seq
1
FAIRE-seq
1
Hi-C
Assay category
24
DNA binding
6
DNA accessibility
3
Transcription
1
3D chromatin structure
Target of assay
21
histone
21
histone modification
12
broad histone mark
9
narrow histone mark
3
control
Date released
47
September, 2018
41
May, 2022
40
February, 2023
34
October, 2019
33
April, 2018
33
July, 2018
32
February, 2021
26
August, 2017
20
June, 2019
19
December, 2017
16
September, 2020
15
November, 2019
13
July, 2019
10
May, 2021
6
August, 2021
6
December, 2019
6
November, 2017
6
November, 2020
5
May, 2019
4
March, 2020
3
August, 2018
3
October, 2022
2
October, 2018
1
June, 2018
Available data
31
bam
25
bigWig
20
bed narrowPeak
14
bigBed narrowPeak
4
bed broadPeak
4
bigBed broadPeak
3
tsv
2
bed bed3+
1
hic
1
tar
Organism
34
Homo sapiens
Biosample type
32
primary cell
2
cell line
Organ
85
brain
67
limb
46
blood vessel
46
vasculature
41
nerve
34
epithelium
30
kidney
25
artery
21
vein
20
eye
15
pancreas
8
heart
6
liver
4
gonad
4
ovary
1
connective tissue
1
lymph node
1
pituitary gland
Project
34
AMP
Genome assembly (visualization)
26
hg19
22
GRCh38
Lab
34
AMP-T2D consortium
Audit category:
1
audit script error
assay_title!
ATAC-seq
BIOSAMPLE
ASSAY
34 results
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Clear Filters
ChIP-seq
DNase-seq
total RNA-seq
FAIRE-seq
Hi-C
primary cell
endothelial cell of umbilical vein
17
2
1
1
epithelial cell of proximal tubule
7
kidney glomerular epithelial cell
1
1
kidney tubule cell
1
1
cell line
glomerular visceral epithelial cell
1
1
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