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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
240
ChIP-seq
30
total RNA-seq
22
ATAC-seq
5
Hi-C
4
pCHi-C
3
DNase-seq
1
FAIRE-seq
Assay category
240
DNA binding
Target of assay
194
histone
194
histone modification
141
narrow histone mark
53
broad histone mark
39
control
7
recombinant protein
7
transcription factor
Date released
342
November, 2017
283
August, 2017
240
October, 2019
165
May, 2021
120
May, 2019
94
December, 2017
80
April, 2019
74
October, 2018
70
November, 2018
50
May, 2020
43
August, 2021
34
December, 2018
32
September, 2018
31
June, 2019
25
January, 2019
24
February, 2018
15
October, 2017
13
November, 2019
8
February, 2021
6
September, 2017
3
March, 2020
Available data
219
bam
176
bigWig
174
bed narrowPeak
58
bigBed narrowPeak
49
tagAlign
2
bed broadPeak
bigBed broadPeak
1
tagAlign bed3+
Organism
240
Homo sapiens
Biosample type
195
tissue
23
cell line
22
primary cell
Organ
84
brain
59
limb
38
blood vessel
38
vasculature
35
nerve
23
artery
22
epithelium
21
kidney
15
vein
13
pancreas
5
heart
5
liver
4
gonad
4
ovary
2
eye
1
connective tissue
1
lymph node
1
pituitary gland
Project
240
AMP
Genome assembly (visualization)
176
GRCh38
176
hg19
Lab
240
AMP-T2D consortium
Audit category:
12
inconsistent ontology term
files.file_type!
bigBed broadPeak
BIOSAMPLE
ASSAY
240 results
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Clear Filters
ChIP-seq
tissue
tibial nerve
35
tibial artery
23
islet of Langerhans
21
brain
5
heart
5
+ See 77 more…
cell line
Panc1
13
RCC 7860 HIF1a re-expression
4
RCC 7860 HIF2a over-expression
3
RCC 7860 vector
3
primary cell
endothelial cell of umbilical vein
15
epithelial cell of proximal tubule
7
See all biosamples
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