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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
18
ChIP-seq
2
ATAC-seq
2
DNase-seq
2
total RNA-seq
1
FAIRE-seq
1
Hi-C
Assay category
18
DNA binding
5
DNA accessibility
2
Transcription
1
3D chromatin structure
Target of assay
18
histone
18
histone modification
10
broad histone mark
8
narrow histone mark
Date released
184
May, 2021
90
May, 2020
72
September, 2018
48
July, 2018
47
August, 2017
43
April, 2018
40
June, 2019
31
July, 2019
26
October, 2019
9
November, 2017
6
November, 2020
5
December, 2019
5
September, 2017
4
May, 2019
3
August, 2018
3
August, 2021
3
February, 2021
3
June, 2018
3
October, 2022
2
October, 2018
1
March, 2020
Available data
25
bam
23
bigWig
21
bed narrowPeak
13
bigBed narrowPeak
4
bed broadPeak
4
bigBed broadPeak
2
bed bed3+
2
tsv
1
hic
1
tar
Organism
26
Homo sapiens
Biosample type
163
tissue
26
primary cell
20
cell line
8
in vitro differentiated cells
Organ
25
epithelium
16
blood vessel
16
vasculature
16
vein
8
kidney
1
liver
Project
26
AMP
Genome assembly (visualization)
26
hg19
22
GRCh38
Lab
26
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
1
audit script error
BIOSAMPLE
ASSAY
26 results
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ChIP-seq
ATAC-seq
DNase-seq
total RNA-seq
FAIRE-seq
Hi-C
primary cell
endothelial cell of umbilical vein
12
2
1
1
epithelial cell of proximal tubule
6
Heart fetal (cardiac muscle cell)
1
Liver fetal (hepatocyte)
1
kidney glomerular epithelial cell
1
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