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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
192
ChIP-seq
22
total RNA-seq
15
ATAC-seq
4
DNase-seq
4
pCHi-C
1
Hi-C
Assay category
192
DNA binding
22
Transcription
19
DNA accessibility
1
3D chromatin structure
Target of assay
165
histone
165
histone modification
126
narrow histone mark
39
broad histone mark
27
control
Date released
238
October, 2019
228
August, 2021
227
August, 2017
193
May, 2020
161
June, 2019
120
July, 2018
115
May, 2019
94
February, 2023
82
November, 2017
80
April, 2019
67
July, 2019
66
May, 2022
51
October, 2018
48
December, 2017
47
September, 2023
40
May, 2021
40
May, 2024
39
November, 2019
37
March, 2020
25
November, 2018
22
February, 2020
22
October, 2017
19
April, 2020
17
February, 2021
14
May, 2023
8
January, 2021
7
December, 2018
7
January, 2019
6
April, 2018
6
September, 2017
5
March, 2019
4
November, 2020
3
December, 2019
1
August, 2022
1
January, 2018
Available data
184
bam
157
bigWig
149
bed narrowPeak
49
tagAlign
46
bigBed narrowPeak
8
tsv
4
bed bed3+
4
bed broadPeak
4
bigBed broadPeak
1
bedpe bed3+
1
hic
1
tagAlign bed3+
Organism
238
Homo sapiens
Biosample type
238
tissue
32
primary cell
17
cell line
Organ
84
brain
69
limb
42
nerve
26
artery
26
blood vessel
26
vasculature
21
eye
8
heart
6
liver
4
gonad
4
kidney
4
ovary
3
pancreas
connective tissue
2
pituitary gland
1
adipose tissue
1
lymph node
1
skin of body
Project
238
AMP
Genome assembly (visualization)
160
hg19
159
GRCh38
Lab
238
AMP-T2D consortium
Audit category:
inconsistent ontology term
audit.ERROR.category!
inconsistent ontology term
organ_slims!
connective tissue
BIOSAMPLE
ASSAY
238 results
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Clear Filters
ChIP-seq
total RNA-seq
ATAC-seq
DNase-seq
pCHi-C
Hi-C
tissue
islet of Langerhans
20
14
13
4
tibial nerve
35
4
1
2
tibial artery
23
1
2
heart
5
2
1
brain
5
1
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