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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
8
ChIP-seq
2
DNase-seq
2
total RNA-seq
1
Hi-C
Assay category
8
DNA binding
2
DNA accessibility
2
Transcription
1
3D chromatin structure
Target of assay
5
histone
5
histone modification
4
broad histone mark
3
control
1
narrow histone mark
Date released
147
May, 2020
134
May, 2022
88
February, 2023
79
May, 2021
59
September, 2020
48
July, 2018
47
February, 2021
43
April, 2018
31
July, 2019
27
September, 2018
26
August, 2017
13
October, 2019
8
January, 2021
8
June, 2019
7
August, 2020
5
December, 2019
4
November, 2020
3
August, 2018
3
June, 2018
3
November, 2017
3
October, 2022
2
October, 2018
1
August, 2021
1
March, 2020
1
March, 2023
1
May, 2019
1
November, 2018
Available data
31
bam
23
bigWig
bed narrowPeak
13
bigBed narrowPeak
4
bed broadPeak
4
bigBed broadPeak
2
bed bed3+
2
tsv
1
hic
1
tar
Organism
13
Homo sapiens
Biosample type
91
tissue
15
cell line
13
primary cell
6
in vitro differentiated cells
Organ
13
epithelium
8
blood vessel
8
vasculature
8
vein
5
kidney
Project
13
AMP
Genome assembly (visualization)
5
hg19
2
GRCh38
Lab
13
AMP-T2D consortium
Audit category:
1
audit script error
files.file_type!
bed narrowPeak
BIOSAMPLE
ASSAY
13 results
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Clear Filters
ChIP-seq
DNase-seq
total RNA-seq
Hi-C
primary cell
endothelial cell of umbilical vein
7
1
kidney glomerular epithelial cell
1
1
kidney tubule cell
1
1
epithelial cell of proximal tubule
1
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