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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
24
ChIP-seq
2
ATAC-seq
2
DNase-seq
2
total RNA-seq
1
FAIRE-seq
Assay category
24
DNA binding
5
DNA accessibility
2
Transcription
Target of assay
21
histone
21
histone modification
12
broad histone mark
9
narrow histone mark
3
control
Date released
149
May, 2021
90
May, 2020
72
September, 2018
58
August, 2017
55
June, 2019
48
July, 2018
43
April, 2018
31
October, 2019
18
July, 2019
9
November, 2017
6
November, 2020
5
December, 2019
5
May, 2019
5
September, 2017
4
August, 2021
3
August, 2018
3
February, 2021
3
June, 2018
2
October, 2018
Available data
31
bam
23
bigWig
21
bed narrowPeak
13
bigBed narrowPeak
4
bed broadPeak
4
bigBed broadPeak
2
bed bed3+
2
tsv
1
hic
1
tar
Organism
31
Homo sapiens
Biosample type
186
tissue
31
primary cell
29
cell line
4
in vitro differentiated cells
Organ
30
epithelium
20
blood vessel
20
vasculature
20
vein
9
kidney
1
liver
Project
31
AMP
Genome assembly (visualization)
25
hg19
22
GRCh38
Lab
31
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
BIOSAMPLE
ASSAY
31 results
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ChIP-seq
ATAC-seq
DNase-seq
total RNA-seq
FAIRE-seq
primary cell
endothelial cell of umbilical vein
17
2
1
epithelial cell of proximal tubule
7
Heart fetal (cardiac muscle cell)
1
Liver fetal (hepatocyte)
1
kidney glomerular epithelial cell
1
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