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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
104
ChIP-seq
22
total RNA-seq
15
ATAC-seq
4
pCHi-C
1
Hi-C
Assay category
104
DNA binding
22
Transcription
15
DNA accessibility
1
3D chromatin structure
Target of assay
86
histone
86
histone modification
77
narrow histone mark
18
control
9
broad histone mark
Date released
545
February, 2021
229
August, 2021
209
August, 2017
146
October, 2019
143
May, 2020
120
July, 2018
95
February, 2023
75
July, 2019
66
May, 2022
47
September, 2023
40
March, 2020
40
May, 2021
40
May, 2024
40
November, 2019
29
October, 2018
25
February, 2020
22
May, 2019
19
April, 2020
16
April, 2019
15
May, 2023
12
December, 2017
9
November, 2018
9
October, 2017
8
January, 2021
6
April, 2018
6
September, 2017
5
March, 2019
4
December, 2018
4
November, 2017
4
November, 2020
3
December, 2019
2
January, 2018
1
August, 2022
1
January, 2019
Available data
186
bam
160
bigWig
151
bed narrowPeak
tagAlign
bigBed narrowPeak
8
tsv
4
bed bed3+
4
bed broadPeak
4
bigBed broadPeak
1
bedpe bed3+
1
hic
1
tagAlign bed3+
Organism
146
Homo sapiens
Biosample type
146
tissue
22
cell line
21
primary cell
6
in vitro differentiated cells
Organ
48
brain
23
limb
21
eye
16
nerve
8
heart
6
artery
6
blood vessel
6
liver
6
vasculature
4
gonad
4
kidney
4
ovary
3
pancreas
1
connective tissue
1
lymph node
1
pituitary gland
1
skin of body
Project
146
AMP
Genome assembly (visualization)
76
hg19
75
GRCh38
Lab
146
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
files.file_type!
bigBed narrowPeak
tagAlign
BIOSAMPLE
ASSAY
146 results
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Clear Filters
ChIP-seq
total RNA-seq
ATAC-seq
pCHi-C
Hi-C
tissue
islet of Langerhans
21
14
13
4
tibial nerve
11
4
1
heart
5
2
1
brain
5
1
liver
5
1
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