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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
7
DNase-seq
1
Hi-C
Assay category
7
DNA accessibility
1
3D chromatin structure
Date released
187
June, 2019
33
August, 2017
15
December, 2017
9
November, 2018
8
October, 2019
5
August, 2021
4
February, 2023
4
July, 2019
2
February, 2021
2
May, 2021
September, 2017
1
May, 2022
1
November, 2020
Available data
250
bam
207
bigWig
189
bed narrowPeak
70
bigBed narrowPeak
49
tagAlign
16
tsv
9
bed broadPeak
9
bigBed broadPeak
8
bed bed3+
hic
3
bedpe bed3+
1
hdf5
1
tagAlign bed3+
1
tar
Organism
8
Homo sapiens
Biosample type
4
tissue
2
cell line
2
primary cell
Organ
4
blood vessel
4
limb
4
vasculature
2
artery
2
epithelium
2
nerve
2
pancreas
2
vein
Project
8
AMP
Genome assembly (visualization)
8
GRCh38
8
hg19
Lab
8
AMP-T2D consortium
Audit category:
1
inconsistent assembly
files.file_type!
hic
month_released!
September, 2017
BIOSAMPLE
ASSAY
8 results
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Clear Filters
DNase-seq
Hi-C
tissue
tibial artery
2
tibial nerve
2
cell line
Panc1
1
1
primary cell
endothelial cell of umbilical vein
2
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