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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
15
ChIP-seq
7
DNase-seq
1
Hi-C
Assay category
15
DNA binding
7
DNA accessibility
1
3D chromatin structure
Target of assay
10
histone
10
histone modification
5
broad histone mark
5
control
5
narrow histone mark
Date released
187
June, 2019
33
August, 2017
15
December, 2017
9
November, 2018
8
October, 2019
5
August, 2021
4
February, 2023
4
July, 2019
2
February, 2021
2
May, 2021
2
September, 2017
1
May, 2022
1
November, 2020
Available data
344
bam
279
bigWig
261
bed narrowPeak
120
bigBed narrowPeak
94
fastq
49
tagAlign
23
bed bed3+
16
tsv
9
bed broadPeak
9
bigBed broadPeak
4
hic
3
bedpe bed3+
1
hdf5
1
tagAlign bed3+
1
tar
Organism
23
Homo sapiens
Biosample type
12
in vitro differentiated cells
4
tissue
3
stem cell
2
cell line
2
primary cell
Organ
4
blood vessel
4
limb
4
vasculature
3
embryo
2
artery
2
epithelium
2
nerve
2
pancreas
2
vein
Project
23
AMP
Genome assembly (visualization)
23
GRCh38
23
hg19
Lab
23
AMP-T2D consortium
Audit category:
6
inconsistent control read length
1
inconsistent assembly
BIOSAMPLE
ASSAY
23 results
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Clear Filters
ChIP-seq
DNase-seq
Hi-C
in vitro differentiated cells
Posterior foregut
3
definitive endodermal cell
3
pancreatic endoderm
3
primitive gut cell
3
tissue
tibial artery
2
tibial nerve
2
stem cell
hESC
3
cell line
Panc1
1
1
primary cell
endothelial cell of umbilical vein
2
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