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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
3
Hi-C
1
ChIP-seq
Assay category
3
3D chromatin structure
1
DNA binding
Target of assay
1
histone
1
histone modification
1
narrow histone mark
Date released
12
March, 2020
4
October, 2019
3
October, 2022
2
August, 2021
2
November, 2019
1
August, 2018
Available data
250
bam
207
bigWig
189
bed narrowPeak
70
bigBed narrowPeak
49
tagAlign
16
tsv
9
bed broadPeak
9
bigBed broadPeak
8
bed bed3+
4
hic
3
bedpe bed3+
1
hdf5
1
tagAlign bed3+
1
tar
Organism
4
Homo sapiens
Biosample type
2
in vitro differentiated cells
2
tissue
Organ
1
brain
1
heart
Project
4
AMP
Genome assembly (visualization)
4
hg19
1
GRCh38
Lab
4
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
BIOSAMPLE
ASSAY
4 results
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Hi-C
ChIP-seq
in vitro differentiated cells
cardiac precursors (cardiac muscle cell)
1
cardiomyocytes (cardiac muscle cell)
1
tissue
heart
1
medial globus pallidus
1
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