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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
4
ATAC-seq
3
ChIP-seq
2
Hi-C
Assay category
4
DNA accessibility
3
DNA binding
2
3D chromatin structure
Target of assay
3
control
Date released
84
February, 2021
17
May, 2021
10
February, 2023
10
March, 2020
10
November, 2019
9
October, 2019
6
November, 2020
4
June, 2019
3
August, 2021
2
December, 2017
2
December, 2019
2
July, 2019
1
February, 2020
1
May, 2019
Available data
21
bam
bigWig
13
bed narrowPeak
5
tsv
2
bedpe bed3+
2
hic
Organism
9
Homo sapiens
Biosample type
4
in vitro differentiated cells
3
cell line
2
primary cell
Organ
3
kidney
1
epithelium
1
liver
Project
9
AMP
Genome assembly (visualization)
6
hg19
4
GRCh38
Lab
9
AMP-T2D consortium
Audit category:
9
inconsistent ontology term
1
audit script error
month_released!
April, 2018
files.file_type!
bigWig
BIOSAMPLE
ASSAY
9 results
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ATAC-seq
ChIP-seq
Hi-C
in vitro differentiated cells
cardiac precursors (cardiac muscle cell)
1
1
cardiomyocytes (cardiac muscle cell)
1
1
cell line
RCC 7860 HIF1a re-expression
1
RCC 7860 HIF2a over-expression
1
RCC 7860 vector
1
primary cell
Heart fetal (cardiac muscle cell)
1
Liver fetal (hepatocyte)
1
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