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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
103
ChIP-seq
8
DNase-seq
3
ATAC-seq
1
FAIRE-seq
Assay category
103
DNA binding
12
DNA accessibility
Target of assay
88
histone
88
histone modification
57
broad histone mark
31
narrow histone mark
15
transcription factor
11
RNA binding protein
Date released
312
November, 2017
210
June, 2019
97
May, 2019
73
November, 2018
70
October, 2019
64
April, 2019
50
December, 2017
45
October, 2018
42
August, 2017
30
December, 2018
21
January, 2019
14
September, 2018
6
October, 2017
5
September, 2017
2
July, 2019
1
November, 2020
Available data
326
bam
254
bigWig
234
bed narrowPeak
115
bigBed narrowPeak
60
fastq
49
tagAlign
18
tsv
9
bed broadPeak
9
bigBed broadPeak
8
bed bed3+
4
hic
3
bedpe bed3+
1
hdf5
1
tagAlign bed3+
1
tar
Organism
115
Homo sapiens
Biosample type
92
tissue
13
primary cell
8
cell line
2
in vitro differentiated cells
Organ
47
pancreas
46
limb
33
blood vessel
33
vasculature
26
nerve
20
artery
14
epithelium
13
vein
8
connective tissue
6
adipose tissue
1
kidney
Project
115
AMP
Genome assembly (visualization)
115
hg19
111
GRCh38
Lab
115
AMP-T2D consortium
Audit category:
1
inconsistent control read length
month_released!
April, 2018
BIOSAMPLE
ASSAY
115 results
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ChIP-seq
DNase-seq
ATAC-seq
FAIRE-seq
tissue
tibial nerve
24
2
body of pancreas
25
tibial artery
18
2
endocrine pancreas
14
omental fat pad
3
+ See 3 more…
primary cell
endothelial cell of umbilical vein
10
2
1
cell line
Panc1
6
1
glomerular visceral epithelial cell
1
in vitro differentiated cells
adipocyte
2
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