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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
6
Hi-C
Assay category
6
3D chromatin structure
Date released
10
March, 2020
4
October, 2019
3
October, 2022
2
August, 2021
2
November, 2019
1
March, 2019
1
March, 2023
Available data
309
bam
238
bigWig
226
bed narrowPeak
70
bigBed narrowPeak
49
tagAlign
36
tsv
9
bed broadPeak
9
bigBed broadPeak
8
bed bed3+
6
hic
5
bedpe bed3+
1
hdf5
1
tagAlign bed3+
1
tar
Organism
6
Homo sapiens
Biosample type
2
in vitro differentiated cells
2
tissue
1
cell line
1
primary cell
Organ
2
epithelium
2
pancreas
1
blood vessel
1
heart
1
vasculature
1
vein
Project
6
AMP
Genome assembly (visualization)
6
hg19
Lab
6
AMP-T2D consortium
Audit category:
3
inconsistent ontology term
1
audit script error
month_released!
April, 2018
BIOSAMPLE
ASSAY
6 results
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Hi-C
in vitro differentiated cells
cardiac precursors (cardiac muscle cell)
1
cardiomyocytes (cardiac muscle cell)
1
tissue
heart
1
islet of Langerhans
1
cell line
EndoC_BH1
1
primary cell
endothelial cell of umbilical vein
1
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