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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
292
ChIP-seq
220
total RNA-seq
122
ATAC-seq
10
DNase-seq
5
Hi-C
5
pCHi-C
1
FAIRE-seq
Assay category
292
DNA binding
Target of assay
223
histone
223
histone modification
168
narrow histone mark
62
control
55
broad histone mark
7
recombinant protein
7
transcription factor
Date released
406
November, 2017
296
August, 2017
242
October, 2019
165
May, 2021
120
May, 2019
94
December, 2017
80
April, 2019
74
October, 2018
70
November, 2018
50
May, 2020
43
August, 2021
34
December, 2018
32
September, 2018
31
June, 2019
25
January, 2019
24
February, 2018
15
October, 2017
13
November, 2019
8
February, 2021
6
September, 2017
3
March, 2020
Available data
269
bam
203
bigWig
201
bed narrowPeak
99
tagAlign
58
bigBed narrowPeak
2
bed broadPeak
2
bigBed broadPeak
1
tagAlign bed3+
Organism
292
Homo sapiens
Biosample type
245
tissue
24
primary cell
23
cell line
Organ
84
brain
59
limb
55
liver
40
blood vessel
40
vasculature
35
nerve
24
epithelium
23
artery
21
kidney
17
vein
13
pancreas
5
heart
4
gonad
4
ovary
2
eye
1
connective tissue
1
lymph node
1
pituitary gland
Project
292
AMP
Genome assembly (visualization)
205
hg19
195
GRCh38
Lab
292
AMP-T2D consortium
Audit category:
12
inconsistent ontology term
month_released!
August, 2020
BIOSAMPLE
ASSAY
292 results
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Clear Filters
ChIP-seq
tissue
liver
55
tibial nerve
35
tibial artery
23
islet of Langerhans
21
brain
5
+ See 77 more…
primary cell
endothelial cell of umbilical vein
17
epithelial cell of proximal tubule
7
cell line
Panc1
13
RCC 7860 HIF1a re-expression
4
RCC 7860 HIF2a over-expression
3
RCC 7860 vector
3
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