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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
82
ChIP-seq
1
ATAC-seq
1
total RNA-seq
Assay category
82
DNA binding
1
DNA accessibility
1
Transcription
Target of assay
75
histone
75
histone modification
72
narrow histone mark
7
control
3
broad histone mark
Date released
91
November, 2017
84
October, 2019
30
June, 2019
28
May, 2019
18
July, 2019
16
October, 2017
11
February, 2020
2
March, 2020
2
November, 2018
1
February, 2023
Available data
81
bam
74
bigWig
73
bed narrowPeak
38
tagAlign
1
tagAlign bed3+
1
tsv
Organism
84
Homo sapiens
Biosample type
84
tissue
Organ
84
brain
69
limb
47
blood vessel
47
vasculature
42
nerve
34
epithelium
26
artery
21
eye
21
vein
18
pancreas
17
kidney
8
heart
6
liver
4
connective tissue
4
gonad
4
ovary
2
pituitary gland
1
adipose tissue
1
lymph node
1
skin of body
Project
84
AMP
Genome assembly (visualization)
76
GRCh38
76
hg19
Lab
84
AMP-T2D consortium
Audit category:
inconsistent ontology term
month_released!
November, 2020
audit.ERROR.category!
inconsistent ontology term
BIOSAMPLE
ASSAY
84 results
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ChIP-seq
ATAC-seq
total RNA-seq
tissue
brain
5
1
superior frontal gyrus
4
central medial thalamic nucleus
3
angular gyrus
2
anterior cingulate gyrus
2
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