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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
99
ChIP-seq
2
ATAC-seq
1
total RNA-seq
Assay category
99
DNA binding
2
DNA accessibility
1
Transcription
Target of assay
89
histone
89
histone modification
76
narrow histone mark
13
broad histone mark
10
control
Date released
91
November, 2017
86
October, 2019
30
June, 2019
28
May, 2019
18
July, 2019
16
October, 2017
12
February, 2020
2
March, 2020
2
November, 2018
1
February, 2023
Available data
92
bam
83
bigWig
81
bed narrowPeak
52
tagAlign
10
fastq
6
bigBed narrowPeak
3
bed broadPeak
1
tagAlign bed3+
1
tsv
Organism
102
Homo sapiens
Biosample type
102
tissue
Organ
102
brain
69
limb
47
blood vessel
47
vasculature
42
nerve
35
epithelium
30
kidney
26
artery
23
pancreas
21
eye
21
vein
8
heart
7
liver
5
connective tissue
4
gonad
4
ovary
2
adipose tissue
2
pituitary gland
1
lymph node
1
skin of body
1
spleen
Project
102
AMP
Genome assembly (visualization)
85
GRCh38
84
hg19
Lab
102
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
Audit category:
4
missing controlled_by
month_released!
November, 2020
BIOSAMPLE
ASSAY
102 results
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ChIP-seq
ATAC-seq
total RNA-seq
tissue
brain
20
1
superior frontal gyrus
4
central medial thalamic nucleus
3
cerebellum (Hemisphere)
2
1
angular gyrus
2
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