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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
28
ChIP-seq
5
DNase-seq
3
total RNA-seq
2
Capture-C
1
ATAC-seq
1
FAIRE-seq
1
Hi-C
Assay category
28
DNA binding
7
DNA accessibility
3
Transcription
1
3D chromatin structure
Target of assay
24
histone
24
histone modification
13
broad histone mark
11
narrow histone mark
4
control
Date released
80
May, 2022
61
September, 2018
52
February, 2023
35
October, 2019
33
April, 2018
33
July, 2018
32
February, 2021
29
August, 2017
26
May, 2021
20
June, 2019
19
December, 2017
19
September, 2020
16
November, 2019
13
July, 2019
7
August, 2020
6
August, 2021
6
December, 2019
6
March, 2020
6
November, 2017
6
November, 2020
5
May, 2019
5
September, 2017
3
August, 2018
3
October, 2022
2
October, 2018
1
June, 2018
Available data
36
bam
28
bigWig
24
bed narrowPeak
14
bigBed narrowPeak
5
bed bed3+
4
bed broadPeak
4
bigBed broadPeak
4
tagAlign
3
tsv
1
hic
1
tar
Organism
41
Homo sapiens
Biosample type
37
primary cell
4
cell line
Organ
160
kidney
100
heart
86
brain
69
limb
53
blood vessel
53
vasculature
42
liver
42
nerve
41
epithelium
28
artery
22
pancreas
21
eye
21
vein
9
connective tissue
8
embryo
4
gonad
4
ovary
2
adipose tissue
2
pituitary gland
1
lymph node
1
skin of body
Project
41
AMP
Genome assembly (visualization)
30
hg19
26
GRCh38
Lab
41
AMP-T2D consortium
Audit category:
3
inconsistent ontology term
1
audit script error
BIOSAMPLE
ASSAY
41 results
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Clear Filters
ChIP-seq
DNase-seq
total RNA-seq
Capture-C
ATAC-seq
FAIRE-seq
Hi-C
primary cell
endothelial cell of umbilical vein
17
2
1
1
epithelial cell of proximal tubule
7
hepatocyte
4
kidney glomerular epithelial cell
1
1
kidney tubule cell
1
1
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cell line
EndoC_BH1
2
glomerular visceral epithelial cell
1
1
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