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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
19
ATAC-seq
10
DNase-seq
1
FAIRE-seq
1
snATAC-seq
Assay category
241
DNA binding
31
DNA accessibility
30
Transcription
5
3D chromatin structure
Date released
181
June, 2019
100
May, 2020
99
May, 2022
95
February, 2023
80
August, 2021
44
February, 2021
34
May, 2021
30
October, 2019
25
November, 2019
16
January, 2021
14
September, 2018
11
May, 2023
10
April, 2020
9
August, 2017
9
November, 2018
8
July, 2019
7
August, 2020
7
October, 2017
5
September, 2017
4
March, 2019
4
March, 2020
3
September, 2020
2
January, 2018
1
August, 2022
Available data
15
bam
15
bed narrowPeak
11
bigWig
9
bigBed narrowPeak
7
bed bed3+
7
bed broadPeak
7
bigBed broadPeak
1
tar
Organism
31
Homo sapiens
Biosample type
20
tissue
7
primary cell
2
cell line
2
in vitro differentiated cells
Organ
7
epithelium
6
blood vessel
6
limb
6
vasculature
5
pancreas
3
artery
connective tissue
3
kidney
3
nerve
3
vein
1
adipose tissue
1
brain
1
eye
1
liver
1
pituitary gland
1
skin of body
Project
31
AMP
Genome assembly (visualization)
15
hg19
14
GRCh38
Lab
31
AMP-T2D consortium
Audit category:
4
inconsistent ontology term
1
audit script error
organ_slims!
connective tissue
BIOSAMPLE
ASSAY
31 results
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Clear Filters
ATAC-seq
DNase-seq
FAIRE-seq
snATAC-seq
tissue
islet of Langerhans
13
1
tibial artery
1
2
tibial nerve
1
2
primary cell
endothelial cell of umbilical vein
2
1
Heart fetal (cardiac muscle cell)
1
Liver fetal (hepatocyte)
1
kidney glomerular epithelial cell
1
kidney tubule cell
1
cell line
Panc1
1
glomerular visceral epithelial cell
1
in vitro differentiated cells
cardiac precursors (cardiac muscle cell)
1
cardiomyocytes (cardiac muscle cell)
1
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