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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
4
total RNA-seq
3
ATAC-seq
Assay category
4
Transcription
3
DNA accessibility
Date released
89
February, 2021
57
August, 2021
7
February, 2023
7
May, 2022
1
October, 2022
0
October, 2019
Available data
254
bed narrowPeak
250
bam
210
bigWig
76
fastq
70
bigBed narrowPeak
49
tagAlign
32
tsv
12
bed bed3+
10
bed bed3
9
bed broadPeak
9
bigBed broadPeak
7
txt
4
hic
3
bed bedgraph
3
bedpe bed3+
1
hdf5
1
tagAlign bed3+
1
tar
Organism
7
Homo sapiens
Biosample type
4
tissue
3
in vitro differentiated cells
Organ
4
bone element
4
skeleton
Project
7
AMP
Genome assembly (visualization)
3
hg19
Lab
4
AMP-T2D consortium
3
Struan F.A. Grant, CHOP
Audit category:
1
inconsistent ontology term
BIOSAMPLE
ASSAY
7 results
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total RNA-seq
ATAC-seq
tissue
acetabular part of hip bone
1
ilium
1
ischium
1
pubis
1
in vitro differentiated cells
Progenitor cell of Hypothalamus (neural progenitor cell)
1
embryonic stem cell
1
neuron cell of Hypothalamus (neuron)
1
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