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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
35
ATAC-seq
5
ChIP-seq
5
total RNA-seq
1
Hi-C
1
single cell RNA-seq
Assay category
35
DNA accessibility
6
Transcription
5
DNA binding
1
3D chromatin structure
Target of assay
5
histone
5
histone modification
3
broad histone mark
2
narrow histone mark
Date released
92
August, 2021
66
February, 2021
57
April, 2019
40
May, 2024
36
February, 2023
35
June, 2019
25
July, 2019
21
May, 2019
8
October, 2019
7
March, 2020
3
February, 2020
3
May, 2021
Available data
40
bed narrowPeak
10
bam
10
bigWig
5
tsv
1
bedpe bed3+
1
hic
Organism
47
Homo sapiens
Biosample type
46
tissue
1
in vitro differentiated cells
Organ
135
pancreas
113
epithelium
87
brain
82
blood vessel
82
vasculature
69
limb
61
artery
52
eye
47
heart
42
nerve
30
kidney
21
vein
20
connective tissue
9
bone element
8
skeleton
7
liver
4
gonad
4
ovary
2
adipose tissue
2
embryo
2
pituitary gland
1
bone marrow
1
lymph node
1
skin of body
1
thymus
Project
47
AMP
Genome assembly (visualization)
45
GRCh38
11
hg19
Lab
47
AMP-T2D consortium
BIOSAMPLE
ASSAY
47 results
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ATAC-seq
ChIP-seq
total RNA-seq
Hi-C
single cell RNA-seq
tissue
coronary artery
35
heart
5
2
1
1
cardiac atrium
1
cardiac ventricle
1
in vitro differentiated cells
cardiac fibroblast
1
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