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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
255
ChIP-seq
50
total RNA-seq
48
ATAC-seq
10
DNase-seq
7
Hi-C
4
pCHi-C
1
FAIRE-seq
Assay category
255
DNA binding
Target of assay
206
histone
206
histone modification
145
narrow histone mark
61
broad histone mark
41
control
8
transcription factor
7
recombinant protein
1
RNA binding protein
Date released
406
November, 2017
289
August, 2017
242
October, 2019
165
May, 2021
120
May, 2019
94
December, 2017
80
April, 2019
74
October, 2018
70
November, 2018
50
May, 2020
43
August, 2021
40
May, 2024
34
December, 2018
32
September, 2018
31
June, 2019
25
January, 2019
24
February, 2018
15
October, 2017
13
November, 2019
8
February, 2021
6
September, 2017
3
March, 2020
Available data
232
bam
187
bigWig
185
bed narrowPeak
58
bigBed narrowPeak
49
tagAlign
2
bed broadPeak
2
bigBed broadPeak
1
tagAlign bed3+
Organism
255
Homo sapiens
Biosample type
195
tissue
36
cell line
24
primary cell
Organ
84
brain
59
limb
40
blood vessel
40
vasculature
37
epithelium
35
nerve
26
pancreas
23
artery
21
kidney
17
vein
5
heart
5
liver
4
gonad
4
ovary
2
eye
1
connective tissue
1
lymph node
1
pituitary gland
Project
255
AMP
Genome assembly (visualization)
189
hg19
187
GRCh38
Lab
255
AMP-T2D consortium
Audit category:
25
inconsistent ontology term
BIOSAMPLE
ASSAY
255 results
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Clear Filters
ChIP-seq
tissue
tibial nerve
35
tibial artery
23
islet of Langerhans
21
brain
5
heart
5
+ See 77 more…
cell line
EndoC_BH1
13
Panc1
13
RCC 7860 HIF1a re-expression
4
RCC 7860 HIF2a over-expression
3
RCC 7860 vector
3
primary cell
endothelial cell of umbilical vein
17
epithelial cell of proximal tubule
7
See all biosamples
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