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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
56
total RNA-seq
1
single cell RNA-seq
Assay category
274
DNA binding
57
Transcription
47
DNA accessibility
5
3D chromatin structure
Date released
563
February, 2021
190
May, 2020
182
May, 2021
180
August, 2021
168
July, 2018
94
February, 2023
89
August, 2017
65
July, 2019
60
May, 2022
56
September, 2020
49
April, 2018
47
September, 2023
30
October, 2019
27
September, 2018
25
February, 2020
20
November, 2019
15
February, 2018
15
March, 2020
9
April, 2020
8
December, 2019
5
January, 2019
4
March, 2023
4
May, 2023
4
November, 2020
3
August, 2018
3
June, 2018
2
October, 2018
1
November, 2018
Available data
42
bam
42
bigWig
42
tsv
27
fastq
1
csv
Organism
57
Homo sapiens
Biosample type
29
primary cell
22
tissue
4
cell line
2
in vitro differentiated cells
Organ
29
epithelium
26
pancreas
14
eye
6
kidney
4
limb
4
nerve
2
heart
1
brain
1
liver
Project
57
AMP
Genome assembly (visualization)
42
GRCh38
42
hg19
Lab
57
AMP-T2D consortium
Audit category:
5
inconsistent ontology term
BIOSAMPLE
ASSAY
57 results
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total RNA-seq
single cell RNA-seq
primary cell
pancreatic alpha cell
10
pancreatic beta cell
10
pancreatic ductal cell
4
pancreatic acinar cell
2
kidney glomerular epithelial cell
1
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tissue
islet of Langerhans
14
tibial nerve
4
heart
2
brain
1
liver
1
cell line
RCC 7860 HIF1a re-expression
1
RCC 7860 HIF2a over-expression
1
RCC 7860 vector
1
glomerular visceral epithelial cell
1
in vitro differentiated cells
cardiac precursors (cardiac muscle cell)
1
cardiomyocytes (cardiac muscle cell)
1
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