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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
24
ChIP-seq
5
DNase-seq
1
ATAC-seq
1
FAIRE-seq
1
Hi-C
Assay category
24
DNA binding
7
DNA accessibility
Transcription
1
3D chromatin structure
Target of assay
21
histone
21
histone modification
12
broad histone mark
9
narrow histone mark
3
control
Date released
80
May, 2022
35
September, 2018
32
October, 2019
29
August, 2017
20
June, 2019
20
May, 2021
19
December, 2017
15
November, 2019
13
February, 2023
8
July, 2019
7
August, 2020
6
August, 2021
6
February, 2021
6
November, 2017
6
November, 2020
5
May, 2019
5
September, 2017
4
March, 2020
3
October, 2022
3
September, 2020
1
December, 2019
Available data
29
bam
22
bigWig
21
bed narrowPeak
14
bigBed narrowPeak
4
bed broadPeak
4
bigBed broadPeak
2
bed bed3+
1
hic
1
tar
Organism
32
Homo sapiens
Biosample type
31
primary cell
1
cell line
Organ
85
brain
65
limb
47
blood vessel
47
vasculature
38
nerve
32
epithelium
26
artery
24
kidney
21
vein
18
pancreas
7
eye
6
heart
6
liver
4
connective tissue
4
gonad
4
ovary
2
pituitary gland
1
adipose tissue
1
lymph node
1
skin of body
Project
32
AMP
Genome assembly (visualization)
24
hg19
20
GRCh38
Lab
32
AMP-T2D consortium
Audit category:
1
audit script error
1
inconsistent ontology term
assay_slims!
Transcription
BIOSAMPLE
ASSAY
32 results
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Clear Filters
ChIP-seq
DNase-seq
ATAC-seq
FAIRE-seq
Hi-C
primary cell
endothelial cell of umbilical vein
17
2
1
1
epithelial cell of proximal tubule
7
Liver fetal (hepatocyte)
1
kidney glomerular epithelial cell
1
kidney tubule cell
1
cell line
glomerular visceral epithelial cell
1
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