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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
11
ChIP-seq
3
DNase-seq
3
total RNA-seq
Assay category
11
DNA binding
3
DNA accessibility
3
Transcription
Target of assay
8
histone
8
histone modification
5
narrow histone mark
3
broad histone mark
3
control
Date released
130
August, 2021
77
June, 2019
47
September, 2023
23
April, 2019
17
October, 2019
14
May, 2023
10
July, 2019
8
February, 2021
3
December, 2019
2
May, 2019
Available data
15
bam
12
bigWig
9
bed narrowPeak
3
tsv
1
bigBed narrowPeak
Organism
17
Homo sapiens
Biosample type
11
primary cell
4
tissue
2
cell line
Organ
84
brain
69
limb
47
blood vessel
47
vasculature
42
nerve
34
epithelium
26
artery
21
eye
21
vein
18
pancreas
17
kidney
8
heart
6
liver
4
connective tissue
4
gonad
4
ovary
2
pituitary gland
1
adipose tissue
1
lymph node
1
skin of body
Project
17
AMP
Genome assembly (visualization)
12
GRCh38
12
hg19
Lab
17
AMP-T2D consortium
Audit category:
inconsistent ontology term
audit.ERROR.category!
inconsistent ontology term
BIOSAMPLE
ASSAY
17 results
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ChIP-seq
DNase-seq
total RNA-seq
primary cell
epithelial cell of proximal tubule
7
kidney glomerular epithelial cell
1
1
kidney tubule cell
1
1
tissue
kidney
4
cell line
glomerular visceral epithelial cell
1
1
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