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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
13
ChIP-seq
3
ATAC-seq
3
single cell RNA-seq
1
DNase-seq
1
Hi-C
Assay category
13
DNA binding
4
DNA accessibility
3
Transcription
1
3D chromatin structure
Target of assay
7
histone
7
histone modification
6
control
4
broad histone mark
3
narrow histone mark
Date released
188
August, 2017
157
July, 2018
104
May, 2022
72
September, 2018
61
May, 2021
56
February, 2023
55
November, 2019
53
October, 2018
39
April, 2018
32
February, 2021
19
September, 2020
18
October, 2019
14
March, 2020
11
September, 2017
10
November, 2020
8
January, 2021
7
August, 2020
7
November, 2018
6
July, 2019
5
March, 2019
5
October, 2017
4
August, 2021
4
June, 2019
3
August, 2018
3
October, 2022
2
May, 2019
1
August, 2022
1
February, 2020
1
June, 2018
Available data
17
bam
11
bigWig
7
bed narrowPeak
7
bigBed narrowPeak
3
fastq
3
tsv
2
bed bed3+
1
bed broadPeak
1
bigBed broadPeak
1
hdf5
Organism
21
Homo sapiens
Biosample type
15
cell line
3
primary cell
3
tissue
Organ
86
brain
69
limb
47
blood vessel
47
vasculature
42
nerve
38
epithelium
30
kidney
26
artery
21
eye
21
pancreas
21
vein
8
heart
7
liver
5
connective tissue
4
gonad
4
ovary
2
adipose tissue
2
pituitary gland
1
lymph node
1
skin of body
Project
21
AMP
Genome assembly (visualization)
11
GRCh38
11
hg19
Lab
21
AMP-T2D consortium
Audit category:
1
inconsistent assembly
BIOSAMPLE
ASSAY
21 results
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Clear Filters
ChIP-seq
ATAC-seq
single cell RNA-seq
DNase-seq
Hi-C
cell line
Panc1
13
1
1
primary cell
pancreatic alpha cell
2
pancreatic acinar cell
1
tissue
islet of Langerhans
3
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