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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
15
ChIP-seq
14
total RNA-seq
4
ATAC-seq
4
pCHi-C
1
DNase-seq
1
Hi-C
Assay category
15
DNA binding
14
Transcription
5
DNA accessibility
1
3D chromatin structure
Target of assay
9
histone
9
histone modification
6
control
5
narrow histone mark
4
broad histone mark
Date released
188
August, 2017
157
July, 2018
104
May, 2022
87
February, 2023
72
September, 2018
61
May, 2021
55
November, 2019
53
October, 2018
39
April, 2018
39
October, 2019
32
February, 2021
19
September, 2020
14
March, 2020
11
June, 2019
11
September, 2017
10
November, 2020
8
January, 2021
7
August, 2020
7
July, 2019
7
November, 2018
5
March, 2019
5
October, 2017
4
August, 2021
3
August, 2018
3
October, 2022
2
February, 2020
2
May, 2019
1
August, 2022
1
June, 2018
Available data
14
bam
8
bigWig
7
bed narrowPeak
7
bigBed narrowPeak
2
bed bed3+
1
bed broadPeak
1
bigBed broadPeak
1
hdf5
Organism
39
Homo sapiens
Biosample type
24
tissue
15
cell line
Organ
86
brain
69
limb
47
blood vessel
47
vasculature
42
nerve
35
epithelium
30
kidney
26
artery
21
eye
21
vein
18
pancreas
8
heart
7
liver
4
connective tissue
4
gonad
4
ovary
2
pituitary gland
1
adipose tissue
1
lymph node
1
skin of body
Project
39
AMP
Genome assembly (visualization)
8
GRCh38
8
hg19
Lab
39
AMP-T2D consortium
Audit category:
1
inconsistent assembly
BIOSAMPLE
ASSAY
39 results
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Clear Filters
ChIP-seq
total RNA-seq
ATAC-seq
pCHi-C
DNase-seq
Hi-C
tissue
islet of Langerhans
2
14
4
4
cell line
Panc1
13
1
1
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