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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
18
ChIP-seq
3
ATAC-seq
2
Hi-C
2
total RNA-seq
1
DNase-seq
Assay category
18
DNA binding
4
DNA accessibility
2
3D chromatin structure
2
Transcription
Target of assay
12
histone
12
histone modification
7
broad histone mark
6
control
5
narrow histone mark
Date released
188
August, 2017
157
July, 2018
104
May, 2022
98
February, 2021
96
August, 2021
92
February, 2023
72
September, 2018
64
May, 2021
57
April, 2019
55
November, 2019
53
October, 2018
39
April, 2018
39
June, 2019
31
July, 2019
26
October, 2019
23
May, 2019
21
March, 2020
19
September, 2020
11
September, 2017
10
November, 2020
8
January, 2021
7
August, 2020
7
November, 2018
5
March, 2019
5
October, 2017
4
February, 2020
3
August, 2018
3
October, 2022
1
August, 2022
1
June, 2018
Available data
21
bam
15
bigWig
12
bed narrowPeak
7
bigBed narrowPeak
2
bed bed3+
2
tsv
1
bed broadPeak
1
bedpe bed3+
1
bigBed broadPeak
1
hdf5
1
hic
Organism
26
Homo sapiens
Biosample type
15
cell line
11
tissue
Organ
86
brain
69
limb
47
blood vessel
47
vasculature
42
nerve
35
epithelium
30
kidney
26
artery
21
eye
21
vein
18
pancreas
8
heart
7
liver
4
connective tissue
4
gonad
4
ovary
2
pituitary gland
1
adipose tissue
1
lymph node
1
skin of body
Project
26
AMP
Genome assembly (visualization)
16
hg19
15
GRCh38
Lab
26
AMP-T2D consortium
Audit category:
1
inconsistent assembly
BIOSAMPLE
ASSAY
26 results
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Clear Filters
ChIP-seq
ATAC-seq
Hi-C
total RNA-seq
DNase-seq
cell line
Panc1
13
1
1
tissue
heart
5
1
2
islet of Langerhans
3
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