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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
12
ChIP-seq
3
total RNA-seq
2
ATAC-seq
Assay category
12
DNA binding
3
Transcription
2
DNA accessibility
Target of assay
7
recombinant protein
7
transcription factor
3
control
2
histone
2
histone modification
2
narrow histone mark
Date released
110
February, 2021
22
May, 2021
18
June, 2019
17
October, 2019
11
November, 2019
10
March, 2020
8
May, 2020
6
February, 2023
6
July, 2018
6
November, 2020
3
August, 2021
3
May, 2019
2
July, 2019
1
February, 2020
1
June, 2018
Available data
17
bam
12
bigWig
11
bed narrowPeak
3
tsv
Organism
17
Homo sapiens
Biosample type
13
cell line
in vitro differentiated cells
2
primary cell
2
tissue
Organ
13
kidney
2
brain
1
epithelium
1
liver
Project
17
AMP
Genome assembly (visualization)
14
GRCh38
14
hg19
Lab
17
AMP-T2D consortium
Audit category:
17
inconsistent ontology term
1
audit script error
target.investigated_as!
broad histone mark
biosample_type!
in vitro differentiated cells
BIOSAMPLE
ASSAY
17 results
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Clear Filters
ChIP-seq
total RNA-seq
ATAC-seq
cell line
RCC 7860 HIF1a re-expression
4
1
RCC 7860 HIF2a over-expression
3
1
RCC 7860 vector
3
1
primary cell
Heart fetal (cardiac muscle cell)
1
Liver fetal (hepatocyte)
1
tissue
brodmann area 43
1
insular gyrus
1
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