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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
27
ChIP-seq
22
total RNA-seq
16
ATAC-seq
4
DNase-seq
4
pCHi-C
1
Hi-C
Assay category
27
DNA binding
22
Transcription
20
DNA accessibility
1
3D chromatin structure
Target of assay
168
histone
histone modification
129
narrow histone mark
39
broad histone mark
27
control
Date released
545
February, 2021
229
August, 2021
166
May, 2020
163
June, 2019
160
August, 2017
120
July, 2018
95
February, 2023
77
July, 2019
74
October, 2019
66
May, 2022
47
September, 2023
44
October, 2018
43
December, 2017
40
May, 2021
40
November, 2019
38
March, 2020
26
May, 2019
26
November, 2018
25
February, 2020
20
April, 2019
19
April, 2020
15
May, 2023
12
November, 2017
11
October, 2017
8
January, 2021
7
December, 2018
6
April, 2018
6
September, 2017
5
March, 2019
4
November, 2020
3
December, 2019
2
January, 2018
1
August, 2022
1
January, 2019
Available data
41
bam
15
bigWig
9
tagAlign
8
tsv
6
bed narrowPeak
5
bigBed narrowPeak
4
bed bed3+
4
bed broadPeak
4
bigBed broadPeak
1
bedpe bed3+
1
hic
Organism
74
Homo sapiens
Biosample type
74
tissue
23
cell line
13
primary cell
8
in vitro differentiated cells
Organ
26
limb
19
eye
18
nerve
9
brain
8
artery
8
blood vessel
8
vasculature
3
heart
3
pancreas
2
kidney
1
adipose tissue
1
connective tissue
1
liver
1
pituitary gland
1
skin of body
Project
74
AMP
Genome assembly (visualization)
16
hg19
14
GRCh38
Lab
74
AMP-T2D consortium
target.investigated_as!
histone modification
BIOSAMPLE
ASSAY
74 results
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ChIP-seq
total RNA-seq
ATAC-seq
DNase-seq
pCHi-C
Hi-C
tissue
islet of Langerhans
14
13
4
tibial nerve
11
4
1
2
tibial artery
5
1
2
heart
2
1
kidney
2
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