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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
120
total RNA-seq
51
single cell RNA-seq
3
Hi-C
1
MPRA
1
pCHi-C
Assay category
171
Transcription
3
3D chromatin structure
Date released
715
February, 2021
411
August, 2017
406
November, 2017
399
May, 2021
341
May, 2020
319
August, 2021
314
October, 2019
218
June, 2019
205
February, 2023
200
May, 2022
168
July, 2018
120
May, 2019
108
July, 2019
94
December, 2017
88
November, 2018
80
April, 2019
76
October, 2018
73
September, 2018
64
March, 2020
61
November, 2019
59
September, 2020
49
April, 2018
47
September, 2023
39
February, 2018
35
December, 2018
30
January, 2019
25
February, 2020
23
October, 2017
19
April, 2020
16
January, 2021
16
November, 2020
15
May, 2023
11
September, 2017
10
December, 2019
8
January, 2018
7
August, 2020
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
167
bam
167
bigWig
167
tsv
54
fastq
4
bedpe bed3+
3
cool
3
hic
1
txt
Organism
175
Homo sapiens
Biosample type
120
tissue
54
primary cell
1
cell line
1
in vitro differentiated cells
Organ
163
pancreas
39
epithelium
3
connective tissue
1
adipose tissue
Project
173
AMP
3
HPAP
Genome assembly (visualization)
170
hg19
167
GRCh38
Lab
173
AMP-T2D consortium
3
Klaus Kaestner, Upenn
Audit category:
6
inconsistent ontology term
3
audit script error
BIOSAMPLE
ASSAY
176 results
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Clear Filters
total RNA-seq
single cell RNA-seq
Hi-C
MPRA
pCHi-C
tissue
islet of Langerhans
120
primary cell
pancreatic alpha cell
9
1
pancreatic beta cell
9
1
pancreatic acinar cell
6
1
pancreatic delta cell
4
pancreatic cell
3
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cell line
MIN6
1
in vitro differentiated cells
white fat cell
1
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