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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
10
MeRIP-seq
4
total RNA-seq
3
Hi-C
1
ATAC-seq
1
MPRA
1
snATAC-seq
Assay category
4
Transcription
3
3D chromatin structure
2
DNA accessibility
Target of assay
5
control
5
nucleotide modification
Date released
713
February, 2021
406
November, 2017
397
May, 2021
378
August, 2017
341
May, 2020
314
August, 2021
306
October, 2019
201
February, 2023
199
May, 2022
168
July, 2018
120
May, 2019
104
July, 2019
80
April, 2019
79
December, 2017
79
November, 2018
76
October, 2018
73
September, 2018
64
March, 2020
61
November, 2019
59
September, 2020
49
April, 2018
47
September, 2023
40
May, 2024
39
February, 2018
35
December, 2018
31
June, 2019
30
January, 2019
25
February, 2020
23
October, 2017
19
April, 2020
16
January, 2021
15
May, 2023
15
November, 2020
10
December, 2019
9
September, 2017
8
January, 2018
7
August, 2020
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
6
bam
5
bigWig
4
tsv
3
bedpe bed3+
3
cool
3
hic
2
bed narrowPeak
bed bed3+
1
bed broadPeak
1
bigBed broadPeak
1
bigBed narrowPeak
1
txt
Organism
19
Homo sapiens
Biosample type
8
primary cell
7
cell line
5
tissue
Organ
14
pancreas
9
epithelium
5
connective tissue
Project
17
AMP
3
HPAP
Genome assembly (visualization)
8
hg19
5
GRCh38
Lab
10
Rohit N. Kulkarni, M.D., Ph.D.
7
AMP-T2D consortium
3
Klaus Kaestner, Upenn
Audit category:
6
inconsistent ontology term
4
audit script error
files.file_type!
bed bed3+
BIOSAMPLE
ASSAY
20 results
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Clear Filters
MeRIP-seq
total RNA-seq
Hi-C
ATAC-seq
MPRA
snATAC-seq
primary cell
osteoblast
4
1
pancreatic acinar cell
1
pancreatic alpha cell
1
pancreatic beta cell
1
cell line
EndoC_BH1
6
MIN6
1
tissue
islet of Langerhans
4
1
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