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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
117
ChIP-seq
20
pCHi-C
9
total RNA-seq
7
Hi-C
2
ATAC-seq
Assay category
117
DNA binding
9
Transcription
7
3D chromatin structure
2
DNA accessibility
Target of assay
91
histone
91
histone modification
56
broad histone mark
35
narrow histone mark
22
control
4
RNA binding protein
4
transcription factor
Date released
545
February, 2021
284
August, 2017
242
October, 2019
229
August, 2021
193
May, 2020
163
June, 2019
120
July, 2018
115
May, 2019
95
February, 2023
82
November, 2017
80
April, 2019
77
July, 2019
74
October, 2018
66
May, 2022
48
December, 2017
47
September, 2023
40
March, 2020
40
May, 2021
40
May, 2024
40
November, 2019
26
November, 2018
25
February, 2020
23
October, 2017
19
April, 2020
15
May, 2023
8
January, 2021
7
December, 2018
7
January, 2019
6
April, 2018
6
September, 2017
5
March, 2019
4
November, 2020
3
December, 2019
2
January, 2018
1
August, 2022
0
October, 2022
Available data
124
bam
104
bigWig
95
bed narrowPeak
93
bigBed narrowPeak
28
tsv
7
bedpe bed3+
7
hic
Organism
155
Homo sapiens
Biosample type
155
tissue
12
cell line
9
primary cell
8
in vitro differentiated cells
4
stem cell
Organ
53
blood vessel
53
vasculature
30
brain
28
heart
12
musculature of body
11
pancreas
7
limb
5
artery
3
liver
2
intestine
1
adipose tissue
1
adrenal gland
1
connective tissue
1
esophagus
1
gonad
1
large intestine
1
lung
1
ovary
1
small intestine
1
spleen
1
stomach
1
thymus
1
urinary bladder
Project
151
AMP
4
T1D
Genome assembly (visualization)
111
hg19
101
GRCh38
Lab
155
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
BIOSAMPLE
ASSAY
155 results
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Clear Filters
ChIP-seq
pCHi-C
total RNA-seq
Hi-C
ATAC-seq
tissue
aorta
13
1
1
1
ascending aorta
16
thoracic aorta
16
temporal lobe
15
angular gyrus
13
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