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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
16
snATAC-seq
6
ChIP-seq
5
ATAC-seq
3
Hi-C
1
MPRA
Assay category
21
DNA accessibility
6
DNA binding
3
3D chromatin structure
Target of assay
6
control
Date released
715
February, 2021
411
August, 2017
406
November, 2017
399
May, 2021
341
May, 2020
319
August, 2021
314
October, 2019
218
June, 2019
205
February, 2023
200
May, 2022
168
July, 2018
120
May, 2019
108
July, 2019
94
December, 2017
88
November, 2018
80
April, 2019
76
October, 2018
73
September, 2018
64
March, 2020
61
November, 2019
59
September, 2020
49
April, 2018
47
September, 2023
39
February, 2018
35
December, 2018
30
January, 2019
25
February, 2020
23
October, 2017
19
April, 2020
16
January, 2021
16
November, 2020
15
May, 2023
11
September, 2017
10
December, 2019
8
January, 2018
7
August, 2020
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
11
bam
11
fastq
5
bed narrowPeak
5
bigBed narrowPeak
5
bigWig
3
bedpe bed3+
3
cool
3
hic
2
bed bed3+
1
txt
Organism
30
Homo sapiens
Biosample type
16
primary cell
14
tissue
1
cell line
Organ
22
pancreas
8
blood
8
bodily fluid
8
epithelium
Project
16
T1D
12
AMP
3
HPAP
Genome assembly (visualization)
10
hg19
7
GRCh38
Lab
16
Kyle Gaulton, UCSD
12
AMP-T2D consortium
3
Klaus Kaestner, Upenn
Audit category:
3
audit script error
BIOSAMPLE
ASSAY
31 results
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Clear Filters
snATAC-seq
ChIP-seq
ATAC-seq
Hi-C
MPRA
primary cell
peripheral blood mononuclear cell
8
pancreatic alpha cell
2
1
pancreatic beta cell
2
1
pancreatic acinar cell
1
1
tissue
islet of Langerhans
4
6
pancreas
4
cell line
MIN6
1
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