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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
120
total RNA-seq
37
single cell RNA-seq
3
Hi-C
Assay category
157
Transcription
3
3D chromatin structure
Date released
188
August, 2017
157
July, 2018
104
May, 2022
72
September, 2018
61
May, 2021
56
February, 2023
55
November, 2019
53
October, 2018
39
April, 2018
32
February, 2021
19
September, 2020
18
October, 2019
14
March, 2020
11
September, 2017
10
November, 2020
8
January, 2021
7
August, 2020
7
November, 2018
6
July, 2019
5
March, 2019
5
October, 2017
4
August, 2021
4
June, 2019
3
August, 2018
3
October, 2022
2
May, 2019
1
August, 2022
1
February, 2020
1
June, 2018
Available data
153
bam
153
bigWig
153
tsv
39
fastq
3
bedpe bed3+
3
cool
3
hic
Organism
160
Homo sapiens
Biosample type
120
tissue
40
primary cell
Organ
160
pancreas
36
epithelium
2
connective tissue
Project
157
AMP
3
HPAP
Genome assembly (visualization)
156
hg19
153
GRCh38
Lab
157
AMP-T2D consortium
3
Klaus Kaestner, Upenn
Audit category:
5
inconsistent ontology term
3
audit script error
BIOSAMPLE
ASSAY
160 results
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total RNA-seq
single cell RNA-seq
Hi-C
tissue
islet of Langerhans
120
primary cell
pancreatic beta cell
9
1
pancreatic alpha cell
7
1
pancreatic acinar cell
5
1
pancreatic delta cell
4
pancreatic ductal cell
3
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