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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
187
DNase-seq
43
single cell RNA-seq
37
ChIP-seq
6
total RNA-seq
5
ATAC-seq
Assay category
192
DNA accessibility
49
Transcription
37
DNA binding
Target of assay
19
histone
19
histone modification
14
control
11
narrow histone mark
8
broad histone mark
4
RNA binding protein
4
transcription factor
Date released
715
February, 2021
411
August, 2017
406
November, 2017
399
May, 2021
341
May, 2020
319
August, 2021
314
October, 2019
218
June, 2019
205
February, 2023
200
May, 2022
168
July, 2018
120
May, 2019
108
July, 2019
94
December, 2017
88
November, 2018
80
April, 2019
76
October, 2018
73
September, 2018
64
March, 2020
61
November, 2019
59
September, 2020
49
April, 2018
47
September, 2023
40
May, 2024
39
February, 2018
35
December, 2018
30
January, 2019
25
February, 2020
23
October, 2017
19
April, 2020
16
January, 2021
16
November, 2020
15
May, 2023
11
September, 2017
10
December, 2019
8
January, 2018
7
August, 2020
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
August, 2022
Available data
278
bam
264
bigWig
215
bed narrowPeak
215
bigBed narrowPeak
189
bed bed3+
187
bed broadPeak
187
bigBed broadPeak
55
fastq
49
tsv
Organism
278
Homo sapiens
Biosample type
175
tissue
103
primary cell
Organ
81
kidney
58
epithelium
54
pancreas
43
musculature of body
35
heart
32
limb
30
brain
20
connective tissue
18
ureter
7
eye
7
vasculature
5
blood vessel
2
artery
2
liver
1
adipose tissue
Project
278
AMP
Genome assembly (visualization)
266
GRCh38
243
hg19
Lab
278
AMP-T2D consortium
Audit category:
26
inconsistent ontology term
month_released!
August, 2022
BIOSAMPLE
ASSAY
278 results
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Clear Filters
DNase-seq
single cell RNA-seq
ChIP-seq
total RNA-seq
ATAC-seq
tissue
heart
18
muscle of arm
17
kidney
13
muscle of leg
13
brain
12
+ See 35 more…
primary cell
cardiac fibroblast
3
5
skeletal muscle satellite cell
8
mesenchymal stem cell
7
pancreatic acinar cell
6
1
pancreatic delta cell
7
+ See 27 more…
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