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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
100
ChIP-seq
12
ATAC-seq
Assay category
100
DNA binding
12
DNA accessibility
Target of assay
42
transcription factor
31
histone
31
histone modification
27
control
16
narrow histone mark
15
broad histone mark
4
RNA binding protein
3
chromatin remodeller
Date released
715
February, 2021
411
August, 2017
406
November, 2017
399
May, 2021
341
May, 2020
319
August, 2021
314
October, 2019
218
June, 2019
205
February, 2023
200
May, 2022
168
July, 2018
120
May, 2019
108
July, 2019
94
December, 2017
88
November, 2018
80
April, 2019
76
October, 2018
73
September, 2018
64
March, 2020
61
November, 2019
59
September, 2020
49
April, 2018
47
September, 2023
39
February, 2018
35
December, 2018
30
January, 2019
25
February, 2020
23
October, 2017
19
April, 2020
16
January, 2021
16
November, 2020
15
May, 2023
11
September, 2017
10
December, 2019
8
January, 2018
7
August, 2020
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
112
fastq
105
bam
84
bigWig
77
bed narrowPeak
55
bigBed narrowPeak
17
bed bed3+
Organism
112
Homo sapiens
Biosample type
54
tissue
43
in vitro differentiated cells
12
primary cell
3
stem cell
Organ
63
liver
31
epithelium
18
pancreas
13
embryo
Project
105
AMP
7
HPAP
Genome assembly (visualization)
91
GRCh38
84
hg19
Lab
105
AMP-T2D consortium
7
Klaus Kaestner, Upenn
Audit category:
27
inconsistent control
4
inconsistent ontology term
Audit category:
1
missing controlled_by
Audit category:
11
inconsistent control read length
BIOSAMPLE
ASSAY
112 results
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Clear Filters
ChIP-seq
ATAC-seq
tissue
liver
38
right lobe of liver
10
islet of Langerhans
6
in vitro differentiated cells
hepatocyte
15
pancreatic endoderm
9
Posterior foregut
5
definitive endodermal cell
5
primitive gut cell
5
+ See 1 more…
primary cell
pancreatic alpha cell
7
pancreatic beta cell
4
pancreatic acinar cell
1
stem cell
hESC
3
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