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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
6
ChIP-seq
5
ATAC-seq
2
Capture-C
1
Hi-C
1
total RNA-seq
Assay category
6
DNA binding
5
DNA accessibility
1
3D chromatin structure
1
Transcription
Target of assay
6
control
Date released
188
August, 2017
157
July, 2018
104
May, 2022
72
September, 2018
61
May, 2021
56
February, 2023
55
November, 2019
53
October, 2018
39
April, 2018
32
February, 2021
19
September, 2020
18
October, 2019
14
March, 2020
11
September, 2017
10
November, 2020
8
January, 2021
7
August, 2020
7
November, 2018
6
July, 2019
5
March, 2019
5
October, 2017
4
August, 2021
4
June, 2019
3
August, 2018
3
October, 2022
2
May, 2019
1
August, 2022
1
February, 2020
1
June, 2018
Available data
11
bam
11
fastq
5
bed narrowPeak
5
bigBed narrowPeak
5
bigWig
2
bed bed3+
1
bedpe bed3+
1
tsv
Organism
15
Homo sapiens
Biosample type
8
tissue
5
primary cell
2
cell line
Organ
130
kidney
92
heart
35
liver
15
pancreas
11
epithelium
8
embryo
6
blood vessel
6
vasculature
5
connective tissue
2
artery
1
adipose tissue
Project
15
AMP
Genome assembly (visualization)
7
GRCh38
7
hg19
Lab
13
AMP-T2D consortium
2
Bing Ren, UCSD
Audit category:
2
inconsistent ontology term
BIOSAMPLE
ASSAY
15 results
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Clear Filters
ChIP-seq
ATAC-seq
Capture-C
Hi-C
total RNA-seq
tissue
islet of Langerhans
6
1
1
primary cell
pancreatic alpha cell
2
pancreatic beta cell
2
pancreatic acinar cell
1
cell line
EndoC_BH1
2
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