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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
31
ATAC-seq
20
total RNA-seq
19
ChIP-seq
Assay category
31
DNA accessibility
20
Transcription
19
DNA binding
Target of assay
10
histone
10
histone modification
8
control
6
broad histone mark
4
narrow histone mark
1
RNA binding protein
1
transcription factor
Date released
572
February, 2021
392
November, 2017
283
May, 2020
282
August, 2017
277
May, 2021
250
October, 2019
218
June, 2019
164
July, 2018
120
May, 2019
94
December, 2017
87
November, 2018
82
July, 2019
79
April, 2019
76
October, 2018
72
September, 2018
59
November, 2019
49
April, 2018
49
August, 2021
39
February, 2018
34
December, 2018
30
January, 2019
24
May, 2022
16
March, 2020
15
October, 2017
11
September, 2017
6
November, 2020
5
December, 2019
3
August, 2018
3
June, 2018
1
March, 2019
Available data
70
bam
42
bed narrowPeak
36
bigWig
20
tsv
11
fastq
5
bigBed narrowPeak
2
bed bed3+
2
bedpe bed3+
2
hic
Organism
70
Homo sapiens
Biosample type
45
tissue
15
cell line
5
in vitro differentiated cells
5
primary cell
Organ
64
pancreas
20
epithelium
1
adipose tissue
1
connective tissue
Project
70
AMP
Genome assembly (visualization)
64
GRCh38
64
hg19
Lab
70
AMP-T2D consortium
Audit category:
21
inconsistent ontology term
BIOSAMPLE
ASSAY
70 results
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Clear Filters
ATAC-seq
total RNA-seq
ChIP-seq
tissue
islet of Langerhans
19
19
6
adipose tissue(adipose white tissue)
1
cell line
EndoC_BH1
1
1
13
in vitro differentiated cells
Pancreatic progenitors (progenitor cell of endocrine pancreas)
5
primary cell
pancreatic alpha cell
2
pancreatic beta cell
2
pancreatic acinar cell
1
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