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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
51
total RNA-seq
32
ChIP-seq
1
single cell RNA-seq
Assay category
52
Transcription
32
DNA binding
DNA accessibility
Target of assay
32
histone
32
histone modification
17
broad histone mark
15
narrow histone mark
Date released
666
February, 2021
406
November, 2017
400
August, 2017
365
May, 2021
281
October, 2019
241
May, 2020
237
August, 2021
168
July, 2018
120
May, 2019
101
May, 2022
100
February, 2023
100
July, 2019
94
December, 2017
80
April, 2019
78
November, 2018
76
October, 2018
60
March, 2020
59
September, 2018
56
September, 2020
49
April, 2018
47
September, 2023
39
February, 2018
35
December, 2018
35
November, 2019
31
June, 2019
30
January, 2019
25
February, 2020
15
October, 2017
14
November, 2020
10
December, 2019
9
April, 2020
6
September, 2017
5
January, 2018
5
March, 2023
4
August, 2018
4
May, 2023
4
October, 2022
3
June, 2018
1
March, 2019
Available data
59
fastq
58
bam
58
bigWig
51
tsv
32
bed narrowPeak
1
csv
Organism
84
Homo sapiens
Biosample type
59
primary cell
25
tissue
Organ
59
pancreas
47
epithelium
12
brain
3
blood vessel
3
heart
3
limb
3
vasculature
2
adipose tissue
2
artery
2
connective tissue
2
musculature of body
1
eye
1
liver
1
nerve
1
spinal cord
Project
84
AMP
Genome assembly (visualization)
58
GRCh38
58
hg19
Lab
84
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
Audit category:
32
missing controlled_by
assay_slims!
DNA accessibility
BIOSAMPLE
ASSAY
84 results
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Clear Filters
total RNA-seq
ChIP-seq
single cell RNA-seq
primary cell
pancreatic ductal cell
4
13
pancreatic endocrine cell
11
pancreatic acinar cell
2
8
pancreatic alpha cell
10
pancreatic beta cell
10
+ See 1 more…
tissue
Ammon's horn
1
C1 segment of cervical spinal cord
1
amygdala
1
anterior cingulate cortex
1
ascending aorta
1
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