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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
106
ChIP-seq
total RNA-seq
14
ATAC-seq
1
single cell RNA-seq
Assay category
106
DNA binding
14
DNA accessibility
1
Transcription
Target of assay
62
histone
62
histone modification
36
broad histone mark
29
control
26
narrow histone mark
15
transcription factor
11
RNA binding protein
Date released
406
November, 2017
322
August, 2017
284
October, 2019
245
August, 2021
218
June, 2019
217
May, 2021
174
May, 2022
170
February, 2021
151
May, 2020
120
May, 2019
112
February, 2023
94
December, 2017
88
November, 2018
80
April, 2019
74
October, 2018
64
July, 2019
49
March, 2020
48
July, 2018
47
September, 2018
47
September, 2023
43
April, 2018
43
September, 2020
41
November, 2019
35
December, 2018
25
January, 2019
24
February, 2018
23
October, 2017
19
April, 2020
16
January, 2021
14
May, 2023
12
November, 2020
11
September, 2017
8
January, 2018
7
August, 2020
5
December, 2019
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
120
bam
105
fastq
91
bed narrowPeak
91
bigWig
59
bigBed narrowPeak
1
csv
Organism
121
Homo sapiens
Biosample type
74
tissue
47
primary cell
Organ
97
pancreas
35
epithelium
23
adipose tissue
23
connective tissue
Project
121
AMP
Genome assembly (visualization)
91
GRCh38
91
hg19
Lab
121
AMP-T2D consortium
Audit category:
32
missing controlled_by
Audit category:
1
inconsistent control read length
assay_title!
total RNA-seq
BIOSAMPLE
ASSAY
121 results
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Clear Filters
ChIP-seq
ATAC-seq
single cell RNA-seq
tissue
body of pancreas
33
endocrine pancreas
16
subcutaneous adipose tissue
12
omental fat pad
11
pancreas
2
primary cell
pancreatic ductal cell
13
4
pancreatic acinar cell
8
3
pancreatic endocrine cell
11
pancreatic beta cell
4
pancreatic alpha cell
3
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