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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
68
ChIP-seq
26
total RNA-seq
22
ATAC-seq
Assay category
68
DNA binding
26
Transcription
22
DNA accessibility
Target of assay
38
histone
38
histone modification
28
transcription factor
22
broad histone mark
16
narrow histone mark
2
RNA binding protein
2
chromatin remodeller
Date released
568
February, 2021
280
November, 2017
276
May, 2021
249
August, 2017
210
June, 2019
207
May, 2020
207
October, 2019
164
July, 2018
105
August, 2021
96
May, 2019
79
July, 2019
79
November, 2018
77
December, 2017
72
September, 2018
64
April, 2019
57
November, 2019
49
April, 2018
47
October, 2018
40
May, 2024
35
February, 2023
31
February, 2018
30
December, 2018
26
January, 2019
16
March, 2020
14
October, 2017
12
May, 2023
7
August, 2020
7
September, 2017
6
November, 2020
5
December, 2019
3
August, 2018
3
June, 2018
3
September, 2020
2
March, 2019
1
March, 2023
Available data
116
bigWig
116
fastq
115
bam
88
bed narrowPeak
50
bigBed narrowPeak
26
tsv
6
tagAlign
4
bed broadPeak
Organism
116
Homo sapiens
Biosample type
72
primary cell
27
cell line
17
tissue
Organ
77
pancreas
61
epithelium
27
blood
27
bodily fluid
7
brain
4
spleen
1
adipose tissue
1
connective tissue
Project
116
AMP
Genome assembly (visualization)
116
GRCh38
115
hg19
Lab
115
AMP-T2D consortium
1
Stephen Parker, UMich
Audit category:
1
inconsistent control
Audit category:
35
missing controlled_by
BIOSAMPLE
ASSAY
116 results
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Clear Filters
ChIP-seq
total RNA-seq
ATAC-seq
primary cell
pancreatic ductal cell
13
4
4
pancreatic beta cell
10
4
pancreatic acinar cell
8
2
3
pancreatic alpha cell
10
3
pancreatic endocrine cell
11
cell line
GM12878
27
tissue
brain
6
body of pancreas
4
spleen
3
1
cerebellum (Hemisphere)
1
islet of Langerhans
1
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