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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
52
ATAC-seq
32
ChIP-seq
26
total RNA-seq
1
snATAC-seq
Assay category
53
DNA accessibility
32
DNA binding
26
Transcription
Target of assay
32
histone
32
histone modification
17
broad histone mark
15
narrow histone mark
Date released
574
February, 2021
316
May, 2021
281
November, 2017
276
August, 2017
260
May, 2020
217
October, 2019
187
June, 2019
July, 2018
97
May, 2019
91
July, 2019
77
December, 2017
72
September, 2018
71
November, 2018
65
April, 2019
60
August, 2021
59
November, 2019
49
April, 2018
47
October, 2018
45
February, 2023
39
May, 2022
32
March, 2020
31
February, 2018
30
December, 2018
26
January, 2019
13
October, 2017
7
September, 2017
6
November, 2020
5
December, 2019
3
August, 2018
3
January, 2018
3
June, 2018
3
March, 2019
3
October, 2022
1
May, 2023
Available data
92
bigWig
90
bam
90
fastq
84
bed narrowPeak
26
tsv
14
bigBed narrowPeak
1
bed bed3+
1
txt
Organism
111
Homo sapiens
Biosample type
72
primary cell
39
tissue
Organ
90
pancreas
61
epithelium
20
liver
1
musculature of body
Project
111
AMP
Genome assembly (visualization)
111
hg19
72
GRCh38
Lab
73
AMP-T2D consortium
20
Karen Mohlke, UNC
18
Kyle Gaulton, UCSD
Audit category:
1
audit script error
Audit category:
32
missing controlled_by
month_released!
July, 2018
BIOSAMPLE
ASSAY
111 results
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Clear Filters
ATAC-seq
ChIP-seq
total RNA-seq
snATAC-seq
primary cell
pancreatic ductal cell
4
13
4
pancreatic beta cell
4
10
pancreatic acinar cell
3
8
2
pancreatic alpha cell
3
10
pancreatic endocrine cell
11
tissue
liver
20
islet of Langerhans
18
skeletal muscle tissue
1
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