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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
36
ChIP-seq
31
total RNA-seq
1
single cell RNA-seq
Assay category
36
DNA binding
32
Transcription
Target of assay
32
histone
32
histone modification
17
broad histone mark
15
narrow histone mark
4
control
Date released
715
February, 2021
399
May, 2021
369
August, 2017
341
May, 2020
319
August, 2021
244
October, 2019
205
February, 2023
200
May, 2022
168
July, 2018
106
July, 2019
94
November, 2017
64
March, 2020
61
November, 2019
59
September, 2018
59
September, 2020
49
April, 2018
47
September, 2023
44
December, 2017
39
February, 2018
31
October, 2018
25
February, 2020
23
May, 2019
19
April, 2020
17
October, 2017
16
April, 2019
16
January, 2021
15
May, 2023
15
November, 2018
15
November, 2020
10
December, 2019
9
January, 2019
8
January, 2018
8
June, 2019
7
August, 2020
6
September, 2017
5
December, 2018
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
103
fastq
102
bam
98
bigWig
67
bed narrowPeak
bigBed narrowPeak
31
tsv
1
csv
Organism
68
Homo sapiens
Biosample type
59
primary cell
8
cell line
1
tissue
Organ
58
pancreas
47
epithelium
5
liver
3
blood
3
bodily fluid
1
spleen
Project
68
AMP
Genome assembly (visualization)
63
GRCh38
63
hg19
Lab
68
AMP-T2D consortium
Audit category:
32
missing controlled_by
files.file_type!
bigBed narrowPeak
BIOSAMPLE
ASSAY
68 results
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Clear Filters
ChIP-seq
total RNA-seq
single cell RNA-seq
primary cell
pancreatic ductal cell
13
4
pancreatic endocrine cell
11
pancreatic acinar cell
8
2
pancreatic alpha cell
10
pancreatic beta cell
10
+ See 1 more…
cell line
HepG2
5
GM12878
3
tissue
spleen
1
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