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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
41
ChIP-seq
26
total RNA-seq
8
ATAC-seq
1
single cell RNA-seq
Assay category
41
DNA binding
27
Transcription
8
DNA accessibility
Target of assay
38
histone
38
histone modification
22
broad histone mark
16
narrow histone mark
3
control
Date released
715
February, 2021
399
May, 2021
369
August, 2017
341
May, 2020
319
August, 2021
244
October, 2019
205
February, 2023
200
May, 2022
168
July, 2018
106
July, 2019
94
November, 2017
64
March, 2020
61
November, 2019
59
September, 2018
59
September, 2020
49
April, 2018
47
September, 2023
44
December, 2017
39
February, 2018
31
October, 2018
25
February, 2020
23
May, 2019
19
April, 2020
17
October, 2017
16
April, 2019
16
January, 2021
15
May, 2023
15
November, 2018
15
November, 2020
10
December, 2019
9
January, 2019
8
January, 2018
8
June, 2019
7
August, 2020
6
September, 2017
5
December, 2018
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
90
fastq
87
bam
86
bigWig
58
bed narrowPeak
26
tsv
bigBed narrowPeak
14
tagAlign
4
bed broadPeak
1
csv
Organism
76
Homo sapiens
Biosample type
59
primary cell
17
tissue
Organ
63
pancreas
47
epithelium
10
brain
1
adipose tissue
1
connective tissue
1
spleen
Project
76
AMP
Genome assembly (visualization)
66
GRCh38
65
hg19
Lab
75
AMP-T2D consortium
1
Stephen Parker, UMich
Audit category:
33
missing controlled_by
files.file_type!
bigBed narrowPeak
BIOSAMPLE
ASSAY
76 results
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Clear Filters
ChIP-seq
total RNA-seq
ATAC-seq
single cell RNA-seq
primary cell
pancreatic ductal cell
13
4
pancreatic endocrine cell
11
pancreatic acinar cell
8
2
pancreatic alpha cell
10
pancreatic beta cell
10
+ See 1 more…
tissue
brain
9
body of pancreas
4
cerebellum (Hemisphere)
1
islet of Langerhans
1
omental fat pad
1
+ See 1 more…
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