Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
26
total RNA-seq
19
ChIP-seq
8
ATAC-seq
1
single cell RNA-seq
Assay category
27
Transcription
19
DNA binding
8
DNA accessibility
Target of assay
38
histone
38
histone modification
broad histone mark
16
narrow histone mark
3
control
Date released
715
February, 2021
341
May, 2020
323
May, 2021
310
August, 2021
278
August, 2017
227
October, 2019
205
February, 2023
200
May, 2022
168
July, 2018
106
July, 2019
89
November, 2017
64
March, 2020
59
September, 2020
55
November, 2019
49
April, 2018
47
September, 2023
42
September, 2018
39
December, 2017
31
February, 2018
31
October, 2018
25
February, 2020
23
May, 2019
20
May, 2024
19
April, 2020
16
April, 2019
16
January, 2021
15
May, 2023
15
November, 2018
15
November, 2020
12
October, 2017
10
December, 2019
9
January, 2019
8
January, 2018
8
June, 2019
7
August, 2020
6
September, 2017
5
December, 2018
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
67
fastq
65
bam
64
bigWig
36
bed narrowPeak
26
tsv
bigBed narrowPeak
4
tagAlign
2
bed broadPeak
1
csv
Organism
54
Homo sapiens
Biosample type
42
primary cell
12
tissue
Organ
46
pancreas
37
epithelium
5
brain
1
adipose tissue
1
connective tissue
1
spleen
Project
54
AMP
Genome assembly (visualization)
49
GRCh38
48
hg19
Lab
53
AMP-T2D consortium
1
Stephen Parker, UMich
Audit category:
15
missing controlled_by
files.file_type!
bigBed narrowPeak
target.investigated_as!
broad histone mark
BIOSAMPLE
ASSAY
54 results
search-icon
table-tab-icon
Clear Filters
total RNA-seq
ChIP-seq
ATAC-seq
single cell RNA-seq
primary cell
pancreatic ductal cell
4
7
pancreatic alpha cell
10
pancreatic beta cell
10
pancreatic acinar cell
2
4
pancreatic endocrine cell
4
+ See 1 more…
tissue
body of pancreas
4
brain
4
cerebellum (Hemisphere)
1
islet of Langerhans
1
omental fat pad
1
+ See 1 more…
See all biosamples
Download