Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
57
ChIP-seq
31
total RNA-seq
14
ATAC-seq
1
single cell RNA-seq
Assay category
57
DNA binding
32
Transcription
14
DNA accessibility
Target of assay
39
histone
39
histone modification
21
broad histone mark
18
narrow histone mark
14
transcription factor
6
RNA binding protein
6
chromatin remodeller
4
control
Date released
324
November, 2017
287
August, 2017
94
December, 2017
88
November, 2018
76
February, 2023
73
September, 2018
60
October, 2018
50
July, 2018
45
February, 2021
44
April, 2018
41
September, 2020
39
February, 2018
35
December, 2018
30
January, 2019
24
May, 2022
17
October, 2017
11
September, 2017
7
August, 2020
5
January, 2018
4
August, 2018
3
June, 2018
1
March, 2019
Available data
103
fastq
102
bam
98
bigWig
67
bed narrowPeak
35
bigBed narrowPeak
31
tsv
1
csv
Organism
103
Homo sapiens
Biosample type
73
primary cell
23
cell line
7
tissue
Organ
72
pancreas
61
epithelium
18
blood
18
bodily fluid
7
spleen
5
liver
Project
103
AMP
Genome assembly (visualization)
98
GRCh38
98
hg19
Lab
103
AMP-T2D consortium
Audit category:
32
missing controlled_by
BIOSAMPLE
ASSAY
103 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
total RNA-seq
ATAC-seq
single cell RNA-seq
primary cell
pancreatic ductal cell
13
4
4
pancreatic beta cell
10
4
pancreatic acinar cell
8
2
3
pancreatic alpha cell
10
3
pancreatic endocrine cell
11
+ See 1 more…
cell line
GM12878
18
HepG2
5
tissue
spleen
7
See all biosamples
Download