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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
50
ChIP-seq
31
total RNA-seq
14
ATAC-seq
1
single cell RNA-seq
Assay category
50
DNA binding
32
Transcription
14
DNA accessibility
Target of assay
33
histone
33
histone modification
17
broad histone mark
16
narrow histone mark
14
transcription factor
6
RNA binding protein
6
chromatin remodeller
3
control
Date released
715
February, 2021
411
August, 2017
406
November, 2017
399
May, 2021
341
May, 2020
319
August, 2021
314
October, 2019
218
June, 2019
205
February, 2023
200
May, 2022
168
July, 2018
120
May, 2019
108
July, 2019
94
December, 2017
80
April, 2019
79
November, 2018
76
October, 2018
73
September, 2018
63
March, 2020
61
November, 2019
59
September, 2020
49
April, 2018
47
September, 2023
40
May, 2024
39
February, 2018
28
December, 2018
25
February, 2020
23
January, 2019
October, 2017
19
April, 2020
16
January, 2021
16
November, 2020
15
May, 2023
11
September, 2017
10
December, 2019
8
January, 2018
7
August, 2020
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
96
fastq
95
bam
92
bigWig
61
bed narrowPeak
31
tsv
29
bigBed narrowPeak
1
csv
Organism
96
Homo sapiens
Biosample type
73
primary cell
23
cell line
Organ
72
pancreas
61
epithelium
18
blood
18
bodily fluid
spleen
5
liver
Project
96
AMP
Genome assembly (visualization)
92
GRCh38
92
hg19
Lab
96
AMP-T2D consortium
Audit category:
32
missing controlled_by
month_released!
October, 2017
organ_slims!
spleen
BIOSAMPLE
ASSAY
96 results
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Clear Filters
ChIP-seq
total RNA-seq
ATAC-seq
single cell RNA-seq
primary cell
pancreatic ductal cell
13
4
4
pancreatic beta cell
10
4
pancreatic acinar cell
8
2
3
pancreatic alpha cell
10
3
pancreatic endocrine cell
11
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cell line
GM12878
18
HepG2
5
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