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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
43
ChIP-seq
31
total RNA-seq
14
ATAC-seq
1
single cell RNA-seq
Assay category
43
DNA binding
32
Transcription
14
DNA accessibility
Target of assay
39
histone
39
histone modification
21
broad histone mark
18
narrow histone mark
transcription factor
6
RNA binding protein
6
chromatin remodeller
4
control
Date released
710
February, 2021
383
May, 2021
364
August, 2017
341
May, 2020
308
August, 2021
307
October, 2019
214
June, 2019
205
February, 2023
200
May, 2022
168
July, 2018
162
November, 2017
115
May, 2019
108
July, 2019
74
April, 2019
73
September, 2018
64
March, 2020
61
October, 2018
60
November, 2019
59
September, 2020
52
December, 2017
49
April, 2018
47
September, 2023
39
February, 2018
35
May, 2024
25
February, 2020
24
November, 2018
October, 2017
19
April, 2020
16
January, 2019
16
January, 2021
16
November, 2020
15
May, 2023
11
September, 2017
10
December, 2019
8
January, 2018
7
August, 2020
7
December, 2018
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
89
fastq
88
bam
84
bigWig
53
bed narrowPeak
31
tsv
21
bigBed narrowPeak
1
csv
Organism
89
Homo sapiens
Biosample type
73
primary cell
9
cell line
7
tissue
Organ
72
pancreas
61
epithelium
7
spleen
5
liver
4
blood
4
bodily fluid
Project
89
AMP
Genome assembly (visualization)
84
GRCh38
84
hg19
Lab
89
AMP-T2D consortium
Audit category:
32
missing controlled_by
month_released!
October, 2017
target.investigated_as!
transcription factor
BIOSAMPLE
ASSAY
89 results
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Clear Filters
ChIP-seq
total RNA-seq
ATAC-seq
single cell RNA-seq
primary cell
pancreatic ductal cell
13
4
4
pancreatic beta cell
10
4
pancreatic acinar cell
8
2
3
pancreatic alpha cell
10
3
pancreatic endocrine cell
11
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cell line
HepG2
5
GM12878
4
tissue
spleen
7
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