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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
126
ChIP-seq
115
total RNA-seq
17
ATAC-seq
1
DNase-seq
1
FAIRE-seq
Assay category
126
DNA binding
115
Transcription
19
DNA accessibility
Target of assay
98
histone
98
histone modification
49
broad histone mark
49
narrow histone mark
21
control
7
transcription factor
2
RNA binding protein
Date released
188
August, 2017
157
July, 2018
104
May, 2022
72
September, 2018
61
May, 2021
56
February, 2023
55
November, 2019
53
October, 2018
39
April, 2018
32
February, 2021
19
September, 2020
18
October, 2019
14
March, 2020
11
September, 2017
10
November, 2020
8
January, 2021
7
August, 2020
7
November, 2018
6
July, 2019
5
March, 2019
5
October, 2017
4
August, 2021
4
June, 2019
3
August, 2018
3
October, 2022
2
May, 2019
1
August, 2022
1
February, 2020
1
June, 2018
Available data
240
bam
240
fastq
231
bigWig
115
tsv
95
bed narrowPeak
31
bigBed narrowPeak
19
bed bed3+
16
tagAlign
12
bed broadPeak
Organism
253
Homo sapiens
Biosample type
147
tissue
113
primary cell
Organ
260
pancreas
125
connective tissue
90
epithelium
57
adipose tissue
54
liver
26
musculature of body
Project
260
AMP
Genome assembly (visualization)
231
hg19
224
GRCh38
Lab
260
AMP-T2D consortium
Audit category:
54
missing controlled_by
Audit category:
8
inconsistent control read length
1
inconsistent assembly
BIOSAMPLE
ASSAY
260 results
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Clear Filters
ChIP-seq
total RNA-seq
ATAC-seq
DNase-seq
FAIRE-seq
tissue
islet of Langerhans
42
89
1
1
pancreas
14
primary cell
pancreatic beta cell
13
10
5
pancreatic alpha cell
13
10
4
pancreatic endocrine cell
23
pancreatic ductal cell
13
4
4
pancreatic acinar cell
8
2
4
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