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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
36
ATAC-seq
27
snATAC-seq
Assay category
590
Transcription
63
DNA accessibility
40
DNA binding
6
DNA methylation
Date released
187
June, 2019
105
February, 2023
100
May, 2020
99
May, 2022
82
August, 2021
49
February, 2021
34
May, 2021
33
October, 2019
26
November, 2019
16
January, 2021
14
September, 2018
11
August, 2017
11
May, 2023
10
April, 2020
10
November, 2018
8
July, 2019
8
October, 2017
7
August, 2020
5
September, 2017
4
March, 2019
4
March, 2020
3
January, 2018
3
September, 2020
2
November, 2020
1
August, 2022
Available data
41
fastq
32
bam
32
bed narrowPeak
15
bigWig
14
bigBed narrowPeak
4
bed bedgraph
2
bed bed3
Organism
63
Homo sapiens
Biosample type
42
primary cell
9
cell line
8
tissue
4
in vitro differentiated cells
Organ
14
epithelium
14
pancreas
8
artery
8
blood vessel
8
bone element
8
heart
8
skeleton
8
vasculature
6
limb
5
connective tissue
1
liver
Project
36
AMP
27
HPAP
Genome assembly (visualization)
36
hg19
32
GRCh38
Lab
36
AMP-T2D consortium
27
Klaus Kaestner, Upenn
Audit category:
27
audit script error
1
inconsistent replicate
BIOSAMPLE
ASSAY
63 results
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ATAC-seq
snATAC-seq
primary cell
Langerhans cell
27
pancreatic beta cell
4
pancreatic ductal cell
4
pancreatic acinar cell
3
pancreatic alpha cell
3
+ See 1 more…
cell line
smooth muscle cell of the coronary artery
8
HepG2
1
tissue
distal epiphysis
1
distal epiphysis of femur
1
distal epiphysis of humerus
1
distal epiphysis of tibia
1
proximal epiphysis
1
+ See 3 more…
in vitro differentiated cells
adipocyte
4
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